Molecular render representing mBER

mBER

Structure-guided VHH nanobody binder design

mBER is an open-source binder design pipeline that conditions AlphaFold-Multimer with sequence and structure templates to design antibody-format binders, validated with million-scale experimental screening. It takes antigen targets and templates as input. Returns binder sequences and models ranked for expression and affinity screening.

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At a glance

Input
Antigen structure with epitope (PDB)
Output
Nanobody designs (PDB)
Developed by
Manifold Bio
Published
Manifold Bio, 2025 · 2025
#nanobodies#binder-design#vhh