
PocketXMol
Pocket-conditioned generation across molecule classes
PocketXMol generates drug-like molecules, peptides and docking poses inside protein binding pockets through a unified model that represents all species as atomic interaction graphs. One framework covers ligand design across molecule classes. Returns 3D structures and poses for downstream scoring.
PocketXMol is being onboarded — request access and be first in line.
At a glance
- Input
- Protein pocket (PDB)
- Output
- Molecules with poses (SDF)
- Developed by
- Tsinghua University
- Published
- Peng et al., 2024 · 2024
#structure-based-design#molecule-generation#pockets
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